sigC protein (Synechocystis sp.) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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	sigC	Probable RNA polymerase sigma-C factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (404 aa)
		(Synechocystis sp.)
Predicted Functional Partners:
	rpoA	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcrip [...] (314 aa)		•	•	•	0.771
	dnaG	DNA primase; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki f [...] (635 aa)	•			•	0.752
	sll0608	hypothetical protein (104 aa)		•			0.645
	rpoB	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcript [...] (1102 aa)		•	•	•	0.612
	secY	Preprotein translocase subunit secY; Involved in protein export. Interacts with secA and secE t [...] (442 aa)		•			0.574
	dnaE-N	DNA polymerase III subunit alpha; DNA polymerase III is a complex, multichain enzyme responsibl [...] (897 aa)		•		•	0.543
	rpsC	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S r [...] (240 aa)		•			0.497
	rpsG	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rR [...] (156 aa)		•		•	0.474
	hdrB	Heterodisulfide reductase subunit B (301 aa)	•				0.436
	rpoC1	DNA-directed RNA polymerase subunit gamma; DNA-dependent RNA polymerase catalyzes the transcrip [...] (626 aa)		•	•	•	0.431

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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