version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
alr2
Alanine racemase 2; Provides the D-alanine required for cell wall biosynthesis (By similarity) (361 aa)
(Staphylococcus aureus COL)
Predicted Functional Partners:
ddl
D-alanine--D-alanine ligase; Cell wall formation (By similarity) (356 aa)
       0.899
dat
D-alanine aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, am [...] (282 aa)
       0.899
alaS
Alanyl-tRNA synthetase (876 aa)
       0.899
dltC
D-alanine--poly(phosphoribitol) ligase subunit 2; Involved in the biosynthesis of D-alanyl-lipo [...] (78 aa)
       0.899
dltA
D-alanine--poly(phosphoribitol) ligase subunit 1; Involved in the biosynthesis of D-alanyl-lipo [...] (485 aa)
       0.899
lysA
Diaminopimelate decarboxylase (421 aa)
       0.869
SACOL1433
Uncharacterized hydrolase SACOL1433 (383 aa)
       0.859
alr1
Alanine racemase 1; Provides the D-alanine required for cell wall biosynthesis (By similarity) (382 aa)
     0.856
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Ca [...] (452 aa)
      0.800
ald2
Alanine dehydrogenase 2; May play a role in cell wall synthesis as L-alanine is an important co [...] (372 aa)
       0.800
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth