version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
atl
Bifunctional autolysin; Endohydrolysis of the di-N-acetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[(Man)5(GlcNAc)2]-Asn structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is released intact. Cleaves the peptidoglycan connecting the daughter cells at the end of the cell division cycle, resulting in the separation of the two newly divided cells. Acts as an autolysin in penicillin-induced lysis (1256 aa)
(Staphylococcus aureus COL)
Predicted Functional Partners:
lytH
N-acetylmuramoyl-L-alanine amidase, family 3; Probably involved in cell-wall metabolism (By sim [...] (291 aa)
      0.823
isdH
Iron-regulated surface determinant protein H; Binds human plasma haptoglobin-hemoglobin complex [...] (895 aa)
       0.752
SACOL1259
Putative uncharacterized protein (868 aa)
       0.743
essB
Protein essB; Required for secretion of esxA and esxB (444 aa)
       0.741
tcaA
Membrane-associated protein tcaA; Inactivation of tcaA leads to an increase in resistance again [...] (460 aa)
       0.739
SACOL0281
Putative uncharacterized protein (614 aa)
       0.738
SACOL0487
Putative uncharacterized protein (441 aa)
       0.733
SACOL2006
Uncharacterized leukocidin-like protein 2 (351 aa)
       0.724
fnbB
fibronectin binding protein B (940 aa)
       0.702
SACOL0879
Putative uncharacterized protein (292 aa)
       0.699
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth