version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
araB
Ribulokinase (545 aa)
(Staphylococcus aureus COL)
Predicted Functional Partners:
rpe
Ribulose-phosphate 3-epimerase (214 aa)
       0.899
SACOL0617
3-hexulose-6-phosphate synthase; Catalyzes the condensation of ribulose 5-phosphate with formal [...] (210 aa)
       0.899
tkt
Transketolase, putative (662 aa)
     0.889
tal
Transaldolase (237 aa)
     0.860
rpiA
Ribose-5-phosphate isomerase A (228 aa)
       0.800
gnd
6-phosphogluconate dehydrogenase, decarboxylating (468 aa)
       0.800
SACOL0198
Putative uncharacterized protein (322 aa)
       0.526
hchA
Chaperone protein hchA; Uses temperature-induced exposure of structured hydrophobic domains to [...] (292 aa)
       0.525
SACOL0599
Uncharacterized epimerase/dehydratase SACOL0599 (321 aa)
       0.483
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth