version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lpxA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (263 aa)
(Campylobacter jejuni RM1221)
Predicted Functional Partners:
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Involved in the biosynthesis of l [...] (294 aa)
     0.994
fabZ
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in saturated fatty acids bio [...] (146 aa)
     0.986
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosa [...] (364 aa)
     0.973
glmU
Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (429 aa)
     0.954
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (321 aa)
  0.919
clpX
ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of th [...] (407 aa)
       0.884
mreC
Rod shape-determining protein MreC (249 aa)
      0.852
dnaE
DNA polymerase III, alpha subunit; DNA polymerase III is a complex, multichain enzyme responsib [...] (1200 aa)
      0.847
mreB
Homolog of E. coli rod shape-determining protein (346 aa)
       0.831
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (191 aa)
     0.822
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth