version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (187 aa)
(Bacteroides fragilis 9343)
Predicted Functional Partners:
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (196 aa)
      0.932
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (147 aa)
      0.855
BF4365
Putative ATP/GTP-binding protein (367 aa)
     0.853
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the t [...] (186 aa)
      0.843
prs
Ribose-phosphate pyrophosphokinase (305 aa)
     0.823
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (90 aa)
      0.816
BF2963
putative transcription-repair coupling factor (1125 aa)
       0.791
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (274 aa)
       0.776
BF0702
Putative transmembrane AAA-metalloprotease FtsH (664 aa)
       0.776
hslR
putative ribosome-associated heat shock protein (141 aa)
       0.767
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
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additional (white) nodes         or: network depth