version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, recA interacts with lexA causing an autocatalytic cleavage which disrupts the DNA-binding part of lexA, leading to derepression of the SOS regulon and eventually DNA repair (By similarity) (203 aa)
(Azoarcus sp. EbN1)
Predicted Functional Partners:
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (346 aa)
    0.983
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesi [...] (1070 aa)
      0.901
ebA3084
Putative uncharacterized protein (225 aa)
       0.897
ebA3079
Putative uncharacterized protein (475 aa)
       0.867
rumB
DNA repair protein (430 aa)
     0.732
dinP
DNA polymerase IV (361 aa)
      0.710
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of D [...] (685 aa)
      0.629
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dep [...] (276 aa)
       0.613
norM
predicted multi antimicrobial extrusion protein MatE; Multidrug efflux pump (By similarity) (463 aa)
       0.601
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (By similarity) (128 aa)
       0.566
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth