version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (196 aa)
(Azoarcus sp. EbN1)
Predicted Functional Partners:
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (201 aa)
      0.951
ebA1406
Phosphoribosyl transferase (316 aa)
     0.900
ebA4139
Predicted GTPase, probably involved in regulation of ribosome function (363 aa)
      0.863
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (284 aa)
       0.844
mfd
Transcription-repair coupling protein Mfd (1157 aa)
       0.792
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (150 aa)
      0.791
glmU
Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (455 aa)
       0.791
rpsR
30S Ribosomal protein S18 (91 aa)
       0.786
ebA3224
putative ribose-phosphate pyrophosphokinase (313 aa)
       0.786
hflB
Cell division protein (630 aa)
       0.764
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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additional (white) nodes         or: network depth