version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (By similarity) (289 aa)
(Anaplasma marginale)
Predicted Functional Partners:
ispD
2-C-methyl-D-erythritol 4-phosphate cytidyltransferase (236 aa)
     0.983
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Converts 4-diphosphocytidyl-2-C-methyl-D [...] (196 aa)
     0.972
prsA
Phosphoribosylpyrophosphate synthetase (259 aa)
       0.795
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of [...] (270 aa)
       0.792
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (218 aa)
       0.785
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which dro [...] (186 aa)
       0.772
glmU
Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (428 aa)
      0.750
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the t [...] (253 aa)
       0.743
znuB
Zinc ABC transporter, permease protein (267 aa)
       0.739
AM447
Putative uncharacterized protein (262 aa)
       0.673
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth