version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (185 aa)
(Bacillus clausii)
Predicted Functional Partners:
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (218 aa)
     0.951
ABC3873
methylase, polypeptide chain release factor (288 aa)
     0.903
prs
Ribose-phosphate pyrophosphokinase (316 aa)
      0.883
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (77 aa)
      0.868
glmU
Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (454 aa)
       0.859
mfd
Transcription-repair coupling factor (1180 aa)
       0.837
ABC4108
GTP-binding protein (366 aa)
      0.836
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (297 aa)
       0.817
ABC3150
Ribose-phosphate pyrophosphokinase (317 aa)
      0.793
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the t [...] (185 aa)
      0.792
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth