version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (By similarity) (244 aa)
(Bacillus clausii)
Predicted Functional Partners:
rimM
Ribosome maturation factor rimM; An accessory protein needed during the final step in the assem [...] (190 aa)
•  •  • 0.990
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (115 aa)
• ••  • 0.987
rpsP
30S ribosomal protein S16 (90 aa)
• ••  • 0.973
ABC2292
RNA-binding protein (76 aa)
•       0.931
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Converts 4-diphosphocytidyl-2-C-methyl-D [...] (159 aa)
••      0.922
smpB
SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (161 aa)
• •     0.902
ffh
Signal recognition particle GTPase (452 aa)
•     • 0.891
ABC2291
Putative uncharacterized protein (140 aa)
•       0.869
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (259 aa)
• •     0.838
pheT
Phenylalanyl-tRNA synthetase beta chain (808 aa)
• •     0.799
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth