version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
yxiA
YxiA (Glycoside hydrolase, family 43 YxiA) (473 aa)
(Bacillus licheniformis)
Predicted Functional Partners:
pelC
Pectate lyase; Involved in depolymerization of polygalacturonate and pectins with different deg [...] (221 aa)
       0.662
deaD
DeaD (ATP-dependent RNA helicase) (481 aa)
       0.573
BL00947
Putative uncharacterized protein (Pectate lyase, Polysaccharide Lyase Family 1) (341 aa)
       0.533
yvfO
Glyccosyl Hydrolase Family 53 (425 aa)
       0.533
BL00606
YdhT (Glutamine amidotransferase, class-II) (247 aa)
       0.517
BL00218
Putative uncharacterized protein (322 aa)
       0.483
abfA
AbfA (Glycoside Hydrolase Family 51) (502 aa)
      0.480
yesY
YesY (Carbohydrate esterase, Family 12 YesY) (214 aa)
       0.471
yesT
YesT (Putative carbohydrate esterase, Family 12, YesT) (238 aa)
       0.468
BL00567
Carbohydrate Esterase Family 12, putative beta-tubulin (219 aa)
       0.449
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth