version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (By similarity) (231 aa)
(Bacillus licheniformis)
Predicted Functional Partners:
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (115 aa)
    0.990
rimM
Ribosome maturation factor rimM; An accessory protein needed during the final step in the assem [...] (174 aa)
     0.980
rpsP
ribosomal protein S16 (BS17) (90 aa)
     0.957
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Converts 4-diphosphocytidyl-2-C-methyl-D [...] (158 aa)
      0.921
ylqC
hypothetical protein (81 aa)
       0.887
smpB
SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (157 aa)
      0.884
ylqD
YlqD (Putative uncharacterized protein ylqD) (128 aa)
       0.881
ffh
Ffh (Signal recognition particle-like (SRP) component) (446 aa)
      0.874
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (255 aa)
      0.862
priA
PriA (Primosomal replication factor Y) (Primosomal protein N') (805 aa)
      0.843
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth