version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
tyrA
Prephenate dehydrogenase (363 aa)
(Staphylococcus aureus MSSA476)
Predicted Functional Partners:
SAS1839
Putative prephenate dehydratase (264 aa)
     0.988
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (432 aa)
    0.987
hisC
Histidinol-phosphate aminotransferase (352 aa)
     0.982
SAS1663
3-deoxy-7-phosphoheptulonate synthase (363 aa)
      0.977
SAS2562
Putative aminotransferase (337 aa)
      0.906
pheB
ACT domain-containing protein pheB; May be a phenylalanine-binding regulatory protein (Potentia [...] (152 aa)
       0.899
aroC
Chorismate synthase (388 aa)
      0.852
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (174 aa)
      0.802
cmk
Cytidylate kinase (219 aa)
       0.798
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptop [...] (404 aa)
      0.798
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth