version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
acnA
Aconitate hydratase (901 aa)
(Staphylococcus aureus MRSA252)
Predicted Functional Partners:
citZ
Citrate synthase II (373 aa)
    0.992
icd
Isocitrate dehydrogenase [NADP] (422 aa)
    0.990
fumC
fumarate hydratase, class-II (461 aa)
     0.884
SAR0879
NifU-like protein (154 aa)
       0.690
odhA
2-oxoglutarate dehydrogenase E1 component; The 2-oxoglutarate dehydrogenase complex catalyzes t [...] (932 aa)
    0.621
clpC
ATP-dependent Clp protease ATP-binding subunit clpC; Required for growth at high temperatures, [...] (818 aa)
       0.617
SAR1575
Putative ADP-ribose pyrophosphatase (180 aa)
       0.612
nupC
Nucleoside permease (404 aa)
       0.563
pflB
Formate acetyltransferase (749 aa)
      0.554
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentan [...] (348 aa)
      0.548
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth