version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
cdsA
putative phosphatidate cytidylyltransferase (260 aa)
(Staphylococcus aureus MRSA252)
Predicted Functional Partners:
uppS
Undecaprenyl pyrophosphate synthetase; Generates undecaprenyl pyrophosphate (UPP) from isopente [...] (256 aa)
       0.967
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; This protein catalyzes the [...] (192 aa)
      0.964
SAR1238
Putative zinc metalloprotease SAR1238 (428 aa)
      0.952
SAR1646
Putative diacylglycerol kinase (114 aa)
      0.936
SAR1804
Putative acyltransferase (205 aa)
      0.919
cls1
Cardiolipin synthetase 1; Catalyzes the reversible phosphatidyl group transfer from one phospha [...] (493 aa)
       0.899
proS
Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction [...] (567 aa)
       0.876
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the t [...] (184 aa)
       0.873
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (By similarity) (240 aa)
       0.867
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to [...] (293 aa)
       0.845
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth