version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
fumC
fumarate hydratase, class II (455 aa)
(Listeria monocytogenes F2365)
Predicted Functional Partners:
ldh
L-lactate dehydrogenase (313 aa)
    0.959
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (484 aa)
       0.953
lmo0355
fumarate reductase (506 aa)
     0.920
acnA
aconitate hydratase (900 aa)
     0.886
argH
Argininosuccinate lyase (456 aa)
     0.861
sod
Superoxide dismutase [Mn]; Destroys radicals which are normally produced within the cells and w [...] (202 aa)
      0.809
gabD
Succinate-semialdehyde dehydrogenase (488 aa)
      0.806
groL
Cpn60 (60 kDa chaperonin); Prevents misfolding and promotes the refolding and proper assembly o [...] (542 aa)
     0.775
purB
Adenylosuccinate lyase (430 aa)
     0.713
lmo2376
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins (By similarity) (194 aa)
     0.699
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth