VV3225 protein (Vibrio vulnificus YJ016) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	VV3225	Peptide deformylase 1; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity) (202 aa)
		(Vibrio vulnificus YJ016)
Predicted Functional Partners:
	fmt	Methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of meth [...] (315 aa)	•	•	•	•	•	0.986
	fmv	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at positi [...] (426 aa)	•					0.816
	VV3223	Smf protein (367 aa)	•					0.740
	VV2985	Pentose-5-phosphate-3-epimerase (222 aa)	•					0.732
	smg	hypothetical protein (159 aa)	•					0.732
	VV3224	Uncharacterized protein (365 aa)	•					0.727
	gmk	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (By similarity) (207 aa)	•		•			0.689
	VV3221	DNA topoisomerase I-related protein (231 aa)	•					0.667
	VV3012	primosome assembly protein PriA (739 aa)	•					0.642
	VVA0989	Serine/threonine protein phosphatase (290 aa)	•					0.594

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Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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