version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (433 aa)
(Blochmannia floridanus)
Predicted Functional Partners:
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (185 aa)
    0.998
aroC
Chorismate synthase (357 aa)
   0.991
aroB
3-dehydroquinate synthase (364 aa)
    0.986
cmk
Cytidylate kinase (232 aa)
      0.980
aroE
shikimate 5-dehydrogenase (294 aa)
    0.979
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvat [...] (365 aa)
     0.979
rpsA
30S ribosomal protein S1 (575 aa)
      0.918
pheA
chorismate mutase/prephenate dehydratase (298 aa)
      0.877
tyrA
Chorismate mutase/prephenate dehydrogenase (377 aa)
      0.805
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (278 aa)
       0.792
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth