rph protein (Bacillus cereus 14579) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	rph	Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (By similarity) (245 aa)
		(Bacillus cereus 14579)
Predicted Functional Partners:
	BC_4493	Nucleoside-triphosphatase; Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might [...] (205 aa)	•	•	0.996
	BC_4492	Putative phosphoesterase (168 aa)	•		0.931
	bcglr	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (269 aa)	•		0.811
	BC_4315	Coproporphyrinogen oxidase, anaerobic (379 aa)	•		0.789
	BC_1085	Metal-dependent hydrolase (244 aa)	•		0.715
	BC_0866	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (276 aa)	•		0.707
	BC_3254	Penicillin acylase II (763 aa)	•		0.692
	BC_3871	Protein yicC (291 aa)	•		0.678
	gmk	Putative guanylate kinase; Essential for recycling GMP and indirectly, cGMP (205 aa)	•		0.670
	thyA	Thymidylate synthase; Provides the sole de novo source of dTMP for DNA biosynthesis (By similar [...] (318 aa)	•		0.667

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth