version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (429 aa)
(Bacillus cereus 14579)
Predicted Functional Partners:
BC_4232
Shikimate kinase (156 aa)
   0.998
aroC2
Chorismate synthase 2 (390 aa)
    0.997
BC_2939
prephenate dehydrogenase (366 aa)
    0.997
aroC1
Chorismate synthase 1 (390 aa)
    0.991
aroE
shikimate 5-dehydrogenase (277 aa)
    0.987
aroB
3-dehydroquinate synthase (361 aa)
    0.985
cmk
Cytidylate kinase (225 aa)
      0.957
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvat [...] (360 aa)
     0.947
hisC2
Histidinol-phosphate aminotransferase 2 (366 aa)
       0.899
BC_4427
Prephenate dehydratase (283 aa)
      0.877
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth