topA protein (Xylella fastidiosa Temecula1) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	topA	DNA topoisomerase 1; The reaction catalyzed by topoisomerases leads to the conversion of one topological isomer of DNA to another (815 aa)
		(Xylella fastidiosa Temecula1)
Predicted Functional Partners:
	smf	DNA processing chain A (381 aa)	•	•				0.955
	smg	hypothetical protein (157 aa)	•		•			0.823
	hslV	ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex (By simi [...] (183 aa)	•					0.746
	ftsZ	Cell division protein ftsZ; This protein is essential to the cell-division process. It seems to [...] (411 aa)	•				•	0.717
	rpoC	DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcrip [...] (1407 aa)				•		0.709
	rpoA	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcrip [...] (332 aa)				•		0.708
	xerC	Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cut [...] (294 aa)	•					0.704
	bioB	Biotin synthase (341 aa)	•					0.696
	rnhB	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (234 aa)	•					0.641
	ddl	D-alanine--D-alanine ligase; Cell wall formation (By similarity) (304 aa)	•					0.632

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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