version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroQ2
3-dehydroquinate dehydratase 2; Catalyzes a trans-dehydration via an enolate intermediate (By similarity) (149 aa)
(Pseudomonas putida KT2440)
Predicted Functional Partners:
PP2406
Shikimate 5-dehydrogenase/quinate 5-dehydrogenase family protein (282 aa)
     0.995
aroB
3-dehydroquinate synthase (365 aa)
    0.981
aroE-1
Shikimate 5-dehydrogenase (274 aa)
      0.954
PP3768
Shikimate 5-dehydrogenase/quinate 5-dehydrogenase family protein (279 aa)
      0.941
aroE-2
Shikimate 5-dehydrogenase (272 aa)
      0.930
PP2608
Shikimate dehydrogenase family protein (269 aa)
      0.924
aroQ-3
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediat [...] (145 aa)
     0.817
aroQ1
3-dehydroquinate dehydratase 1; Catalyzes a trans-dehydration via an enolate intermediate (By s [...] (151 aa)
     0.808
accB
Acetyl-CoA carboxylase, biotin carboxyl carrier protein (153 aa)
       0.696
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (172 aa)
      0.670
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
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additional (white) nodes         or: network depth