STRINGSTRING
CRK7 CRK7 K24G6.12 K24G6.12 K14B20.12 K14B20.12 NHL1 NHL1 RER1B RER1B F21P8.10 F21P8.10 CML47 CML47 CEF CEF EGC2 EGC2 Q9LK47_ARATH Q9LK47_ARATH FDC2 FDC2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK7Cysteine-rich receptor-like protein kinase 7. (659 aa)    
Predicted Functional Partners:
K24G6.12
LOW PSII ACCUMULATION protein (DUF1995).
      
 0.800
K14B20.12
Trafficking protein particle complex subunit-like protein.
      
 0.793
NHL1
NDR1/HIN1-like protein 1; May play a role in plant immunity.
   
  
 0.789
RER1B
Protein RER1B; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment; Belongs to the RER1 family.
      
 0.758
F21P8.10
Bromo-adjacent homology (BAH) domain-containing protein.
      
 0.736
CML47
Probable calcium-binding protein CML47; Potential calcium sensor.
   
 0.726
CEF
Protein transport protein Sec24-like CEF; Component of the COPII coat, that covers ER-derived vesicles involved in transport from the endoplasmic reticulum to the Golgi apparatus. COPII is composed of at least five proteins: the SEC23/24 complex, the SEC13/31 complex, and the protein SAR1. Acts in the cytoplasm to promote the transport of secretory, plasma membrane, and vacuolar proteins from the endoplasmic reticulum to the Golgi complex (By similarity).
      
 0.718
EGC2
EG45-like domain containing protein 2; Plays a systemic role in water and solute homeostasis.
   
  
 0.658
Q9LK47_ARATH
Nucleic acid-binding proteins superfamily.
      
 0.632
FDC2
Ferredoxin C 2, chloroplastic; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (Probable). Mediates alternative electron partitioning in conditions of acceptor limitation at photosystem I (By similarity); Belongs to the 2Fe2S plant-type ferredoxin family.
    
 
 0.613
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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