hemF protein (Agrobacterium tumefaciens) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	hemF	Coproporphyrinogen 3 oxidase, aerobic (303 aa)
		(Agrobacterium tumefaciens)
Predicted Functional Partners:
	hemE	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporp [...] (344 aa)	•	•	•	•	0.992
	hemB	Delta-aminolevulinic acid dehydratase (337 aa)	•	•		•	0.829
	hemC	Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbil [...] (309 aa)	•			•	0.766
	purD	Phosphoribosylamine--glycine ligase (425 aa)	•				0.701
	hemH	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (344 aa)	•	•		•	0.700
	fbcF	Ubiquinol-cytochrome C reductase iron-sulfur subunit (192 aa)	•	•			0.672
	Atu1601	Oxygen-independent coproporphyrinogen III oxidase (450 aa)				•	0.670
	greA	Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elon [...] (158 aa)	•				0.666
	AGR_C_4082	tRNA/rRNA methyltransferase (161 aa)	•				0.662
	AGR_C_4086	Putative uncharacterized protein (97 aa)	•				0.650

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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interactors shown:

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additional (white) nodes		or: network depth