pth protein (Agrobacterium tumefaciens) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	pth	Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (238 aa)
		(Agrobacterium tumefaciens)
Predicted Functional Partners:
	rplI	50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (191 aa)	•	•				0.905
	rplY	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (202 aa)	•		•		•	0.891
	AGR_C_4063	GTP-binding protein (367 aa)	•				•	0.858
	AGR_C_4057	Acetyltransferase (150 aa)	•					0.845
	rpsR	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (82 aa)	•	•				0.836
	prs	Ribose-phosphate pyrophosphokinase (310 aa)	•			•	•	0.822
	ftsH	Metalloprotease (648 aa)	•					0.790
	glmU	Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (453 aa)	•					0.790
	mfd	Transcription-repair coupling factor (1165 aa)	•					0.789
	ispE	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (299 aa)	•					0.776

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth