rtcA protein (Nostoc sp.) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	rtcA	Probable RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) the enzyme acts on RNA-N3'P to produce RNA-N3'PP5'A; (C) a non catalytic nucleophilic attack by the adjacent 2'hydroxyl on the phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (By similarity) (348 aa)
		(Nostoc sp.)
Predicted Functional Partners:
	all3526	hypothetical protein (393 aa)	•	•	•	0.904
	rpiA	Ribose-5-phosphate isomerase A (236 aa)			•	0.675
	alr3825	hypothetical protein (297 aa)	•			0.589
	prs	Ribose-phosphate pyrophosphokinase (330 aa)	•			0.569
	alr0740	hypothetical protein (508 aa)	•			0.530
	glmM	Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1 [...] (494 aa)	•			0.509
	asr1899	hypothetical protein (77 aa)	•			0.463
	rplK	50S ribosomal protein L11; This protein binds directly to 23S ribosomal RNA (By similarity) (141 aa)	•			0.438
	ilvN	acetolactate synthase III small subunit (182 aa)	•			0.435
	alr0820	Sun protein (449 aa)	•			0.432

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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