version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
acsF1
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) (By similarity) (351 aa)
(Nostoc sp.)
Predicted Functional Partners:
alr3201
Mg-protoporphyrin IX methyl transferase (228 aa)
     0.958
acsF3
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 3; Catalyzes the formation of [...] (358 aa)
     0.904
acsF2
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2; Catalyzes the formation of [...] (358 aa)
     0.903
alr0030
hypothetical protein (590 aa)
       0.899
por
Protochlorophyllide oxido-reductase (329 aa)
       0.899
chlB
Light-independent protochlorophyllide reductase subunit B; Uses Mg-ATP and reduced ferredoxin t [...] (508 aa)
      0.791
chlN
Light-independent protochlorophyllide reductase subunit N; Uses Mg-ATP and reduced ferredoxin t [...] (467 aa)
      0.784
chlP
Geranylgeranyl hydrogenase (406 aa)
      0.743
alr4548
photosystem II protein D2 (351 aa)
       0.739
psbD1
Photosystem II D2 protein; One of the two reaction center proteins of photosystem II (PSII), D2 [...] (351 aa)
       0.739
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth