Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B3H6E3_ARATH | K15E6.170 | B3H6E3 | Q9FID9 | Uncharacterized protein. | Probable receptor-like protein kinase At5g38990. | 0.806 |
B3H6E3_ARATH | MXF12.3 | B3H6E3 | Q9FID7 | Uncharacterized protein. | Uncharacterized protein. | 0.927 |
CAP1 | K15E6.170 | O65902 | Q9FID9 | Cyclase-associated protein 1; Actin monomer binding protein that accelerates the exchange of ADP for ATP. Regulates the pool of unpolymerized ATP-actin. Key intermediate between actin-depolymerizing factor (ADF)-mediated disassembly and the profilin-based nucleation and elongation machinery. Belongs to the CAP family. | Probable receptor-like protein kinase At5g38990. | 0.769 |
CAP1 | LLG2 | O65902 | Q6NLF4 | Cyclase-associated protein 1; Actin monomer binding protein that accelerates the exchange of ADP for ATP. Regulates the pool of unpolymerized ATP-actin. Key intermediate between actin-depolymerizing factor (ADF)-mediated disassembly and the profilin-based nucleation and elongation machinery. Belongs to the CAP family. | GPI-anchored protein LLG2. | 0.544 |
CAP1 | LLG3 | O65902 | Q9M0I0 | Cyclase-associated protein 1; Actin monomer binding protein that accelerates the exchange of ADP for ATP. Regulates the pool of unpolymerized ATP-actin. Key intermediate between actin-depolymerizing factor (ADF)-mediated disassembly and the profilin-based nucleation and elongation machinery. Belongs to the CAP family. | GPI-anchored protein LLG3. | 0.540 |
F24J7.90 | K15E6.170 | O49471 | Q9FID9 | Probable disease resistance protein At4g19530; Probable disease resistance protein. Belongs to the disease resistance TIR-NB-LRR family. | Probable receptor-like protein kinase At5g38990. | 0.772 |
K15E6.170 | B3H6E3_ARATH | Q9FID9 | B3H6E3 | Probable receptor-like protein kinase At5g38990. | Uncharacterized protein. | 0.806 |
K15E6.170 | CAP1 | Q9FID9 | O65902 | Probable receptor-like protein kinase At5g38990. | Cyclase-associated protein 1; Actin monomer binding protein that accelerates the exchange of ADP for ATP. Regulates the pool of unpolymerized ATP-actin. Key intermediate between actin-depolymerizing factor (ADF)-mediated disassembly and the profilin-based nucleation and elongation machinery. Belongs to the CAP family. | 0.769 |
K15E6.170 | F24J7.90 | Q9FID9 | O49471 | Probable receptor-like protein kinase At5g38990. | Probable disease resistance protein At4g19530; Probable disease resistance protein. Belongs to the disease resistance TIR-NB-LRR family. | 0.772 |
K15E6.170 | LLG2 | Q9FID9 | Q6NLF4 | Probable receptor-like protein kinase At5g38990. | GPI-anchored protein LLG2. | 0.719 |
K15E6.170 | LLG3 | Q9FID9 | Q9M0I0 | Probable receptor-like protein kinase At5g38990. | GPI-anchored protein LLG3. | 0.739 |
K15E6.170 | MXF12.3 | Q9FID9 | Q9FID7 | Probable receptor-like protein kinase At5g38990. | Uncharacterized protein. | 0.807 |
K15E6.170 | RLP14 | Q9FID9 | F4HTV4 | Probable receptor-like protein kinase At5g38990. | Receptor-like protein 14. | 0.771 |
K15E6.170 | RLP21 | Q9FID9 | Q9SKK2 | Probable receptor-like protein kinase At5g38990. | Receptor like protein 21. | 0.740 |
K15E6.170 | RLP45 | Q9FID9 | F4J9A8 | Probable receptor-like protein kinase At5g38990. | Receptor-like protein 45; Belongs to the RLP family. | 0.785 |
K15E6.170 | RPS4B-2 | Q9FID9 | Q9FHF0 | Probable receptor-like protein kinase At5g38990. | Disease resistance protein RPS4B; Disease resistance (R) protein that specifically recognizes the AvrRps4 type III effector avirulence protein from P.syringae. Heterodimerization with RRS1B is required to form a functional complex to recognize AvrRps4 and to mediate the hypersensitive response. | 0.752 |
LLG2 | CAP1 | Q6NLF4 | O65902 | GPI-anchored protein LLG2. | Cyclase-associated protein 1; Actin monomer binding protein that accelerates the exchange of ADP for ATP. Regulates the pool of unpolymerized ATP-actin. Key intermediate between actin-depolymerizing factor (ADF)-mediated disassembly and the profilin-based nucleation and elongation machinery. Belongs to the CAP family. | 0.544 |
LLG2 | K15E6.170 | Q6NLF4 | Q9FID9 | GPI-anchored protein LLG2. | Probable receptor-like protein kinase At5g38990. | 0.719 |
LLG3 | CAP1 | Q9M0I0 | O65902 | GPI-anchored protein LLG3. | Cyclase-associated protein 1; Actin monomer binding protein that accelerates the exchange of ADP for ATP. Regulates the pool of unpolymerized ATP-actin. Key intermediate between actin-depolymerizing factor (ADF)-mediated disassembly and the profilin-based nucleation and elongation machinery. Belongs to the CAP family. | 0.540 |
LLG3 | K15E6.170 | Q9M0I0 | Q9FID9 | GPI-anchored protein LLG3. | Probable receptor-like protein kinase At5g38990. | 0.739 |
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