STRINGSTRING
PAFAH1B1 PAFAH1B1 PAFAH1B2 PAFAH1B2 PAFAH1B3 PAFAH1B3 PAFAH2 PAFAH2 PLA2G7 PLA2G7 LPCAT4 LPCAT4 LPCAT1 LPCAT1 CEPT1 CEPT1 CHPT1 CHPT1 NDEL1 NDEL1 NDE1 NDE1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
PAFAH1B1Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...] (410 aa)    
Predicted Functional Partners:
PAFAH1B2
Platelet activating factor acetylhydrolase 1b catalytic subunit 2.
    
 0.992
PAFAH1B3
Platelet activating factor acetylhydrolase 1b catalytic subunit 3.
    
 0.981
PAFAH2
Platelet-activating factor acetylhydrolase.
     
 0.953
PLA2G7
Platelet-activating factor acetylhydrolase.
   
 
 0.915
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
     
  0.900
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
  0.900
CEPT1
Choline/ethanolamine phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
CHPT1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
NDEL1
NudE neurodevelopment protein 1 like 1.
    
 
 0.861
NDE1
NudE neurodevelopment protein 1.
    
 
 0.830
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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