gyrA protein (Helicobacter pylori J99) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	gyrA	DNA gyrase subunit A; DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (828 aa)
		(Helicobacter pylori J99)
Predicted Functional Partners:
	gyrB	Gyrase B; DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-depen [...] (773 aa)	•	•	•		•	•	•	0.999
	HP_0703	putative TRANSCRIPTIONAL REGULATOR (381 aa)	•							0.869
	HP_0702	Putative uncharacterized protein (157 aa)	•							0.869
	dnaA	Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and r [...] (457 aa)	•						•	0.835
	dgkA	Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane pho [...] (128 aa)	•							0.809
	HP_0699	Putative uncharacterized protein (342 aa)	•							0.809
	coaD	Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- [...] (157 aa)	•						•	0.780
	tmk	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways o [...] (191 aa)	•			•				0.762
	hemE	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporp [...] (339 aa)	•							0.748
	dnaN	DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible [...] (374 aa)	•						•	0.740

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth