cagA protein (Helicobacter pylori J99) - STRING interaction network

cagA protein (Helicobacter pylori J99) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	cagA	Cytotoxicity-associated immunodominant antigen; May be necessary for the transcription, folding, export, or function of the cytotoxin (1167 aa)
		(Helicobacter pylori J99)
Predicted Functional Partners:
	cag3	cag island protein (481 aa)	•	•	•		0.946
	0527	cag island protein (1819 aa)	•		•	•	0.899
	cagM	cag island protein (376 aa)	•		•		0.881
	cag5	cag island protein, DNA transfer protein (748 aa)	•		•	•	0.830
	cag8	cag island protein (522 aa)	•		•		0.819
	cagE	Cag pathogenicity island protein (Cag pathogenicity island protein E); Involved in DNA transfer [...] (983 aa)			•	•	0.810
	cagC	cag island protein (115 aa)			•		0.800
	cagD	cag island protein (208 aa)			•		0.800
	cagF	Putative outer membrane protein CagF (268 aa)			•		0.800
	cagG	cag island protein (142 aa)			•		0.800

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth

Server load: medium (43%)

Link to this page