STRINGSTRING
MICPUN_105435 MICPUN_105435 MICPUN_59001 MICPUN_59001 Nia Nia MICPUN_68463 MICPUN_68463 MICPUN_101593 MICPUN_101593 MICPUN_98056 MICPUN_98056 MICPUN_64769 MICPUN_64769 MICPUN_91006 MICPUN_91006 MICPUN_81444 MICPUN_81444
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_105435GATA-type domain-containing protein. (196 aa)    
Predicted Functional Partners:
MICPUN_59001
Uncharacterized protein.
    
 0.505
Nia
Nitrate reductase apoenzyme.
      
 0.495
MICPUN_68463
Uncharacterized protein.
      
 0.495
MICPUN_101593
ARID/BRIGHT DNA binding domain protein.
   
 
 0.436
MICPUN_98056
Histone acetyltransferase.
    
 0.425
MICPUN_64769
N-acetyltransferase domain-containing protein.
    
 0.425
MICPUN_91006
Transcription elongation-nucleosome displacement protein.
   
 0.411
MICPUN_81444
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.410
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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