STRINGSTRING
MICPUN_59110 MICPUN_59110 MICPUN_75328 MICPUN_75328 MICPUN_62284 MICPUN_62284 MICPUN_100642 MICPUN_100642 Rad50 Rad50 MICPUN_56516 MICPUN_56516 MICPUN_55629 MICPUN_55629
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_59110SANT domain-containing protein. (488 aa)    
Predicted Functional Partners:
MICPUN_75328
Uncharacterized protein.
    
 0.473
MICPUN_62284
DRBM domain-containing protein.
    
 0.473
MICPUN_100642
Uncharacterized protein.
    
 0.447
Rad50
Rad50 DNA repair/recombination protein.
    
 0.429
MICPUN_56516
FHA domain-containing protein.
    
  0.413
MICPUN_55629
Cold-shock protein.
    
 0.412
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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