STRINGSTRING
RCOM_1609110 RCOM_1609110 RCOM_0512620 RCOM_0512620 RCOM_0904580 RCOM_0904580 RCOM_1684630 RCOM_1684630 RCOM_0992050 RCOM_0992050 RCOM_0874360 RCOM_0874360 RCOM_0607550 RCOM_0607550 RCOM_0214170 RCOM_0214170 RCOM_0574850 RCOM_0574850 RCOM_0574860 RCOM_0574860 RCOM_0574890 RCOM_0574890
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1609110R2r3-myb transcription factor, putative. (308 aa)    
Predicted Functional Partners:
RCOM_0512620
Uncharacterized protein.
   
 
 0.615
RCOM_0904580
Uncharacterized protein.
      
 0.613
RCOM_1684630
HAP2-GCS1 domain-containing protein.
      
 0.600
RCOM_0992050
F-box/leucine rich repeat protein, putative.
      
 0.520
RCOM_0874360
Lgl_C domain-containing protein.
      
 0.514
RCOM_0607550
Alba domain-containing protein.
      
 0.508
RCOM_0214170
Microtubule associated protein xmap215, putative.
      
 0.410
RCOM_0574850
Uncharacterized protein.
      
 0.408
RCOM_0574860
Uncharacterized protein.
      
 0.408
RCOM_0574890
Uncharacterized protein.
      
 0.408
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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