Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0083800 | RCOM_0484360 | B9T8A0 | B9SZ58 | Ring finger, putative. | Ankyrin repeat-containing protein, putative. | 0.664 |
RCOM_0083800 | RCOM_0711530 | B9T8A0 | B9RR99 | Ring finger, putative. | Ring finger, putative. | 0.901 |
RCOM_0083800 | RCOM_0913520 | B9T8A0 | B9RTW5 | Ring finger, putative. | Ubiquitin-activating enzyme E1c, putative. | 0.855 |
RCOM_0083800 | RCOM_1019980 | B9T8A0 | B9RWJ2 | Ring finger, putative. | Uncharacterized protein. | 0.865 |
RCOM_0083800 | RCOM_1457540 | B9T8A0 | B9RTZ8 | Ring finger, putative. | Brushy protein, putative. | 0.557 |
RCOM_0083800 | RCOM_1508680 | B9T8A0 | B9RAU5 | Ring finger, putative. | Zinc ion binding protein, putative. | 0.598 |
RCOM_0083800 | RCOM_1620060 | B9T8A0 | B9REB5 | Ring finger, putative. | LIGULELESS1 protein, putative. | 0.546 |
RCOM_0083800 | RCOM_1720820 | B9T8A0 | B9S532 | Ring finger, putative. | Uncharacterized protein. | 0.865 |
RCOM_0484360 | RCOM_0083800 | B9SZ58 | B9T8A0 | Ankyrin repeat-containing protein, putative. | Ring finger, putative. | 0.664 |
RCOM_0484360 | RCOM_0711530 | B9SZ58 | B9RR99 | Ankyrin repeat-containing protein, putative. | Ring finger, putative. | 0.664 |
RCOM_0484360 | RCOM_1457540 | B9SZ58 | B9RTZ8 | Ankyrin repeat-containing protein, putative. | Brushy protein, putative. | 0.460 |
RCOM_0484360 | RCOM_1620060 | B9SZ58 | B9REB5 | Ankyrin repeat-containing protein, putative. | LIGULELESS1 protein, putative. | 0.582 |
RCOM_0711530 | RCOM_0083800 | B9RR99 | B9T8A0 | Ring finger, putative. | Ring finger, putative. | 0.901 |
RCOM_0711530 | RCOM_0484360 | B9RR99 | B9SZ58 | Ring finger, putative. | Ankyrin repeat-containing protein, putative. | 0.664 |
RCOM_0711530 | RCOM_0913520 | B9RR99 | B9RTW5 | Ring finger, putative. | Ubiquitin-activating enzyme E1c, putative. | 0.855 |
RCOM_0711530 | RCOM_1019980 | B9RR99 | B9RWJ2 | Ring finger, putative. | Uncharacterized protein. | 0.865 |
RCOM_0711530 | RCOM_1457540 | B9RR99 | B9RTZ8 | Ring finger, putative. | Brushy protein, putative. | 0.557 |
RCOM_0711530 | RCOM_1508680 | B9RR99 | B9RAU5 | Ring finger, putative. | Zinc ion binding protein, putative. | 0.598 |
RCOM_0711530 | RCOM_1620060 | B9RR99 | B9REB5 | Ring finger, putative. | LIGULELESS1 protein, putative. | 0.546 |
RCOM_0711530 | RCOM_1720820 | B9RR99 | B9S532 | Ring finger, putative. | Uncharacterized protein. | 0.865 |
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