STRINGSTRING
RCOM_1448130 RCOM_1448130 RCOM_1599800 RCOM_1599800 RCOM_1451970 RCOM_1451970 RCOM_1019520 RCOM_1019520 RCOM_0302130 RCOM_0302130 RCOM_1343940 RCOM_1343940 RCOM_1003460 RCOM_1003460 RCOM_1076950 RCOM_1076950 RCOM_0980540 RCOM_0980540 RCOM_0924540 RCOM_0924540 RCOM_1496660 RCOM_1496660
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1448130Ocs element-binding factor, putative. (159 aa)    
Predicted Functional Partners:
RCOM_1599800
Transcription factor, putative.
    
 
 0.527
RCOM_1451970
Transcription factor HBP-1b(C1), putative.
  
 
 
 0.527
RCOM_1019520
Transcription factor, putative.
    
 
 0.527
RCOM_0302130
Transcription factor, putative.
    
 
 0.527
RCOM_1343940
SBP-type domain-containing protein.
  
 
 0.472
RCOM_1003460
Squamosa promoter-binding protein, putative.
  
 
 0.446
RCOM_1076950
Phosphatidylethanolamine-binding protein, putative.
    
 
 0.445
RCOM_0980540
FLZ-type domain-containing protein.
  
     0.441
RCOM_0924540
Transcription factor hy5, putative.
    
 0.426
RCOM_1496660
Phosphatidylethanolamine-binding protein, putative.
    
 
 0.414
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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