STRINGSTRING
RCOM_1052210 RCOM_1052210 RCOM_1431990 RCOM_1431990 RCOM_0680380 RCOM_0680380 RCOM_1354870 RCOM_1354870 RCOM_0225530 RCOM_0225530 RCOM_1597450 RCOM_1597450 RCOM_1444020 RCOM_1444020 RBR RBR RCOM_1046940 RCOM_1046940 RCOM_0659080 RCOM_0659080 RCOM_0312320 RCOM_0312320
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1052210Transcription factor, putative. (601 aa)    
Predicted Functional Partners:
RCOM_1431990
Always early, putative.
   
 0.778
RCOM_0680380
Always early, putative.
   
 0.778
RCOM_1354870
Transcription factor Dp-1, putative; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.
   
 0.733
RCOM_0225530
E2F4,5, putative.
  
 0.694
RCOM_1597450
E2F4,5, putative.
  
 0.680
RCOM_1444020
RB_A domain-containing protein.
   
 0.678
RBR
Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family.
   
 0.678
RCOM_1046940
WD-repeat protein, putative.
   
 0.666
RCOM_0659080
Retinoblastoma-binding protein, putative.
   
 0.666
RCOM_0312320
WD-repeat protein, putative.
   
 0.666
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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