STRINGSTRING
RCOM_1377050 RCOM_1377050 RCOM_0578410 RCOM_0578410 RCOM_1677040 RCOM_1677040 RCOM_1031890 RCOM_1031890 RCOM_1080540 RCOM_1080540 RCOM_0766690 RCOM_0766690 RCOM_1546390 RCOM_1546390 RCOM_0801590 RCOM_0801590 RCOM_0198920 RCOM_0198920 RCOM_1445050 RCOM_1445050 RCOM_1050490 RCOM_1050490
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1377050Zinc finger protein, putative. (298 aa)    
Predicted Functional Partners:
RCOM_0578410
Transcription factor, putative; Belongs to the GRAS family.
      
 0.523
RCOM_1677040
Mitochondrial import receptor subunit TOM20, putative.
  
     0.517
RCOM_1031890
Transcriptional factor TINY, putative.
  
     0.509
RCOM_1080540
Mitochondrial import receptor subunit TOM20, putative.
  
     0.507
RCOM_0766690
WRKY transcription factor, putative.
  
   
 0.502
RCOM_1546390
DELLA protein DWARF8, putative; Belongs to the GRAS family.
      
 0.491
RCOM_0801590
Histidine-containing phosphotransfer protein, putative.
  
     0.485
RCOM_0198920
DNA binding protein, putative.
  
     0.482
RCOM_1445050
DNA binding protein, putative.
  
     0.481
RCOM_1050490
Transcriptional factor TINY, putative.
  
     0.479
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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