STRINGSTRING
RCOM_0905720 RCOM_0905720 RCOM_1122330 RCOM_1122330 RCOM_1288540 RCOM_1288540 RCOM_0474850 RCOM_0474850 RCOM_0104420 RCOM_0104420 RCOM_0674920 RCOM_0674920 RCOM_1767500 RCOM_1767500 RCOM_1615240 RCOM_1615240 RCOM_1616760 RCOM_1616760 RCOM_1046210 RCOM_1046210 RCOM_1914050 RCOM_1914050
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0905720Triptychon and cpc, putative. (74 aa)    
Predicted Functional Partners:
RCOM_1122330
NAC domain-containing protein 21/22, putative.
  
 
   0.497
RCOM_1288540
Ubiquitin-like domain-containing protein.
  
     0.473
RCOM_0474850
QLQ domain-containing protein.
  
     0.464
RCOM_0104420
Uncharacterized protein.
  
     0.451
RCOM_0674920
NAC domain-containing protein, putative.
  
     0.444
RCOM_1767500
Uncharacterized protein.
  
     0.443
RCOM_1615240
Transcription factor, putative.
  
     0.432
RCOM_1616760
ATRAD3, putative.
  
     0.431
RCOM_1046210
Phenylalanine ammonia-lyase, putative.
  
     0.430
RCOM_1914050
Uncharacterized protein.
  
     0.429
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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