STRINGSTRING
RCOM_0813580 RCOM_0813580 RCOM_1467360 RCOM_1467360 RCOM_1592450 RCOM_1592450 RCOM_1015170 RCOM_1015170 RCOM_0716180 RCOM_0716180 RCOM_1080540 RCOM_1080540 RCOM_1677040 RCOM_1677040 RCOM_0419560 RCOM_0419560 RCOM_1674080 RCOM_1674080 RCOM_1377050 RCOM_1377050 RCOM_0137680 RCOM_0137680
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0813580AP2/ERF domain-containing protein. (288 aa)    
Predicted Functional Partners:
RCOM_1467360
Dof-type domain-containing protein.
  
     0.514
RCOM_1592450
Zinc finger protein, putative.
  
     0.508
RCOM_1015170
Dof-type domain-containing protein.
  
     0.493
RCOM_0716180
Dof-type domain-containing protein.
  
     0.488
RCOM_1080540
Mitochondrial import receptor subunit TOM20, putative.
  
     0.478
RCOM_1677040
Mitochondrial import receptor subunit TOM20, putative.
  
     0.469
RCOM_0419560
Zinc finger protein, putative.
  
     0.461
RCOM_1674080
Zinc finger protein, putative.
  
     0.459
RCOM_1377050
Zinc finger protein, putative.
  
     0.436
RCOM_0137680
Dof-type domain-containing protein.
  
     0.432
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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