STRINGSTRING
RCOM_1298710 RCOM_1298710 RCOM_1594220 RCOM_1594220 RCOM_0484480 RCOM_0484480 RCOM_1693000 RCOM_1693000 RCOM_1615840 RCOM_1615840 RCOM_1616000 RCOM_1616000 RCOM_1616250 RCOM_1616250 RCOM_1453680 RCOM_1453680 RCOM_0435770 RCOM_0435770 RCOM_2050390 RCOM_2050390 RCOM_0547290 RCOM_0547290
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1298710NAC domain-containing protein, putative. (421 aa)    
Predicted Functional Partners:
RCOM_1594220
Methyltransferase.
  
     0.510
RCOM_0484480
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.502
RCOM_1693000
TCP domain-containing protein.
  
 
   0.490
RCOM_1615840
Uncharacterized protein.
  
     0.488
RCOM_1616000
DNA binding protein, putative.
  
     0.488
RCOM_1616250
ATP binding protein, putative.
  
     0.483
RCOM_1453680
Transcription factor, putative; Belongs to the GRAS family.
  
     0.481
RCOM_0435770
Transcription factor, putative.
  
     0.473
RCOM_2050390
Uncharacterized protein.
  
     0.472
RCOM_0547290
Protein binding protein, putative.
  
     0.469
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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