Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0233200 | RCOM_0498420 | B9T424 | B9SWP1 | C2H2-type domain-containing protein. | Transcription factor, putative. | 0.463 |
RCOM_0233200 | RCOM_0519450 | B9T424 | B9SRZ1 | C2H2-type domain-containing protein. | Methyltransferase. | 0.525 |
RCOM_0233200 | RCOM_0539840 | B9T424 | B9SIR8 | C2H2-type domain-containing protein. | PMR5N domain-containing protein. | 0.527 |
RCOM_0233200 | RCOM_0784920 | B9T424 | B9SB52 | C2H2-type domain-containing protein. | TOC159_MAD domain-containing protein. | 0.514 |
RCOM_0233200 | RCOM_1315100 | B9T424 | B9RYZ7 | C2H2-type domain-containing protein. | Methyltransferase. | 0.517 |
RCOM_0233200 | RCOM_1340980 | B9T424 | B9RMW7 | C2H2-type domain-containing protein. | NAC domain-containing protein. | 0.515 |
RCOM_0233200 | RCOM_1355270 | B9T424 | B9S0J1 | C2H2-type domain-containing protein. | TCP domain-containing protein. | 0.525 |
RCOM_0233200 | RCOM_1452410 | B9T424 | B9RG98 | C2H2-type domain-containing protein. | Transcription factor, putative. | 0.507 |
RCOM_0233200 | RCOM_1496780 | B9T424 | B9R9F4 | C2H2-type domain-containing protein. | Methyltransferase. | 0.529 |
RCOM_0233200 | RCOM_1613790 | B9T424 | B9RDK8 | C2H2-type domain-containing protein. | Methyltransferase. | 0.525 |
RCOM_0498420 | RCOM_0233200 | B9SWP1 | B9T424 | Transcription factor, putative. | C2H2-type domain-containing protein. | 0.463 |
RCOM_0498420 | RCOM_0519450 | B9SWP1 | B9SRZ1 | Transcription factor, putative. | Methyltransferase. | 0.497 |
RCOM_0498420 | RCOM_0539840 | B9SWP1 | B9SIR8 | Transcription factor, putative. | PMR5N domain-containing protein. | 0.521 |
RCOM_0498420 | RCOM_0784920 | B9SWP1 | B9SB52 | Transcription factor, putative. | TOC159_MAD domain-containing protein. | 0.427 |
RCOM_0498420 | RCOM_1315100 | B9SWP1 | B9RYZ7 | Transcription factor, putative. | Methyltransferase. | 0.500 |
RCOM_0498420 | RCOM_1340980 | B9SWP1 | B9RMW7 | Transcription factor, putative. | NAC domain-containing protein. | 0.518 |
RCOM_0498420 | RCOM_1355270 | B9SWP1 | B9S0J1 | Transcription factor, putative. | TCP domain-containing protein. | 0.528 |
RCOM_0498420 | RCOM_1452410 | B9SWP1 | B9RG98 | Transcription factor, putative. | Transcription factor, putative. | 0.526 |
RCOM_0498420 | RCOM_1496780 | B9SWP1 | B9R9F4 | Transcription factor, putative. | Methyltransferase. | 0.519 |
RCOM_0498420 | RCOM_1613790 | B9SWP1 | B9RDK8 | Transcription factor, putative. | Methyltransferase. | 0.518 |
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