STRINGSTRING
RCOM_0734420 RCOM_0734420 RCOM_0339610 RCOM_0339610 RCOM_1340450 RCOM_1340450 RCOM_1471230 RCOM_1471230 RCOM_1311460 RCOM_1311460 RCOM_0961910 RCOM_0961910 RCOM_0545900 RCOM_0545900 RCOM_1486170 RCOM_1486170 RCOM_0798500 RCOM_0798500 RCOM_1398820 RCOM_1398820 RCOM_0865010 RCOM_0865010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0734420DNA binding protein, putative. (316 aa)    
Predicted Functional Partners:
RCOM_0339610
Elf4 domain-containing protein.
   
 
 0.665
RCOM_1340450
HTH myb-type domain-containing protein.
     
 0.619
RCOM_1471230
Sensory transduction histidine kinase, putative.
   
  
 0.610
RCOM_1311460
BHLH domain-containing protein.
    
 
 0.537
RCOM_0961910
Protein GIGANTEA, putative.
    
 
 0.535
RCOM_0545900
PAS domain-containing protein.
    
 
 0.534
RCOM_1486170
Uncharacterized protein.
   
 
 0.532
RCOM_0798500
Uncharacterized protein.
   
 
 0.532
RCOM_1398820
tRNA-splicing endonuclease subunit Sen2-2, putative.
      
 0.529
RCOM_0865010
Leucine-rich repeat-containing protein, putative.
      
 0.527
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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