STRINGSTRING
RCOM_0689060 RCOM_0689060 RCOM_1381630 RCOM_1381630 RCOM_1027520 RCOM_1027520 RCOM_1453710 RCOM_1453710 RCOM_1018440 RCOM_1018440 RCOM_0121050 RCOM_0121050 RCOM_0092820 RCOM_0092820 RCOM_0925380 RCOM_0925380 RCOM_1430840 RCOM_1430840 RCOM_1048270 RCOM_1048270 RCOM_1048380 RCOM_1048380
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0689060LOB domain-containing protein, putative. (223 aa)    
Predicted Functional Partners:
RCOM_1381630
Uncharacterized protein.
   
 0.940
RCOM_1027520
Uncharacterized protein.
    
 0.847
RCOM_1453710
Endonuclease, putative.
   
 0.761
RCOM_1018440
Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.
    
 
 0.744
RCOM_0121050
DNA repair endonuclease xp-f / mei-9 / rad1, putative.
   
 0.744
RCOM_0092820
Uncharacterized protein.
    
 
 0.744
RCOM_0925380
DUF1767 domain-containing protein.
    
 0.734
RCOM_1430840
Excision repair cross-complementing 1 ercc1, putative.
   
 0.709
RCOM_1048270
Aspartyl-tRNA synthetase, putative.
   
 0.661
RCOM_1048380
Asparagine--tRNA ligase, putative.
   
 0.661
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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