STRINGSTRING
RCOM_0603270 RCOM_0603270 RCOM_1580750 RCOM_1580750 RCOM_1019500 RCOM_1019500 RCOM_0451400 RCOM_0451400 RCOM_0030510 RCOM_0030510 RCOM_1673780 RCOM_1673780 RCOM_0766690 RCOM_0766690 RCOM_1691830 RCOM_1691830 RCOM_1690990 RCOM_1690990 RCOM_1465160 RCOM_1465160 RCOM_0799320 RCOM_0799320
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0603270Zinc finger protein, putative. (245 aa)    
Predicted Functional Partners:
RCOM_1580750
Ethylene-responsive transcription factor, putative.
  
     0.517
RCOM_1019500
AP2/ERF domain-containing protein.
  
     0.516
RCOM_0451400
Protein BABY BOOM, putative.
  
     0.512
RCOM_0030510
DNA binding protein, putative.
  
     0.503
RCOM_1673780
Ethylene-responsive transcription factor, putative.
  
    0.495
RCOM_0766690
WRKY transcription factor, putative.
      
 0.491
RCOM_1691830
DNA binding protein, putative.
  
     0.476
RCOM_1690990
DNA binding protein, putative.
  
     0.467
RCOM_1465160
Ocs element-binding factor, putative.
  
   
 0.466
RCOM_0799320
Transcriptional factor TINY, putative.
  
     0.462
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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