STRINGSTRING
RCOM_0836390 RCOM_0836390 RCOM_0353890 RCOM_0353890 RCOM_0572620 RCOM_0572620 RCOM_1575710 RCOM_1575710 RCOM_0618070 RCOM_0618070 RCOM_1355740 RCOM_1355740 RCOM_1134940 RCOM_1134940 RCOM_1502950 RCOM_1502950 RCOM_1437970 RCOM_1437970 RCOM_1039440 RCOM_1039440 RCOM_1054850 RCOM_1054850
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0836390Transcription factor, putative. (319 aa)    
Predicted Functional Partners:
RCOM_0353890
Uncharacterized protein.
    
 
 0.529
RCOM_0572620
TPR_REGION domain-containing protein.
  
     0.516
RCOM_1575710
LOB domain-containing protein, putative.
  
     0.508
RCOM_0618070
Uncharacterized protein.
  
     0.502
RCOM_1355740
Cyclic nucleotide-binding domain-containing protein.
  
     0.501
RCOM_1134940
LOB domain-containing protein, putative.
  
     0.492
RCOM_1502950
ERD1 protein, chloroplast, putative; Belongs to the ClpA/ClpB family.
      
 0.491
RCOM_1437970
BHLH domain-containing protein.
  
     0.491
RCOM_1039440
Uncharacterized protein.
  
     0.491
RCOM_1054850
Uncharacterized protein.
  
     0.491
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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