STRINGSTRING
RCOM_1012500 RCOM_1012500 RCOM_1585600 RCOM_1585600 RCOM_1674080 RCOM_1674080 RCOM_0716180 RCOM_0716180 RCOM_0380000 RCOM_0380000 RCOM_0004450 RCOM_0004450 RCOM_0092380 RCOM_0092380 RCOM_1080540 RCOM_1080540 RCOM_1592450 RCOM_1592450 RCOM_1677040 RCOM_1677040 RCOM_0819800 RCOM_0819800
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1012500Ethylene-responsive transcription factor, putative. (173 aa)    
Predicted Functional Partners:
RCOM_1585600
Acc synthase, putative.
      
 0.523
RCOM_1674080
Zinc finger protein, putative.
  
     0.517
RCOM_0716180
Dof-type domain-containing protein.
  
     0.514
RCOM_0380000
Kinase, putative; Belongs to the protein kinase superfamily.
      
 0.507
RCOM_0004450
Zinc finger protein, putative.
  
     0.505
RCOM_0092380
AP2/ERF domain-containing protein.
  
   
 0.494
RCOM_1080540
Mitochondrial import receptor subunit TOM20, putative.
  
     0.490
RCOM_1592450
Zinc finger protein, putative.
  
     0.475
RCOM_1677040
Mitochondrial import receptor subunit TOM20, putative.
  
     0.472
RCOM_0819800
Floral homeotic protein APETALA2, putative.
  
     0.464
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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