STRINGSTRING
RCOM_0705620 RCOM_0705620 RCOM_0481980 RCOM_0481980 RCOM_0548760 RCOM_0548760 RCOM_1341690 RCOM_1341690 RCOM_1430840 RCOM_1430840 RCOM_0176500 RCOM_0176500 RCOM_1180160 RCOM_1180160 RCOM_1347470 RCOM_1347470 RCOM_1182920 RCOM_1182920 RCOM_0862450 RCOM_0862450 RCOM_1076570 RCOM_1076570
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0705620DNA-binding protein RAV1, putative. (371 aa)    
Predicted Functional Partners:
RCOM_0481980
DNA binding protein, putative.
  
   
 0.524
RCOM_0548760
Membrane associated ring finger 1,8, putative.
      
 0.497
RCOM_1341690
Uncharacterized protein.
      
 0.485
RCOM_1430840
Excision repair cross-complementing 1 ercc1, putative.
      
 0.456
RCOM_0176500
PAC, putative.
  
     0.449
RCOM_1180160
Protein COBRA, putative.
  
     0.439
RCOM_1347470
Triacylglycerol lipase, putative.
  
     0.434
RCOM_1182920
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
  
     0.433
RCOM_0862450
Myosin heavy chain, clone, putative.
  
     0.427
RCOM_1076570
LOB domain-containing protein.
  
   
 0.425
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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