STRINGSTRING
RCOM_0512220 RCOM_0512220 RCOM_0374000 RCOM_0374000 RCOM_1619480 RCOM_1619480 RCOM_0026480 RCOM_0026480 RCOM_0233610 RCOM_0233610 RCOM_0232890 RCOM_0232890 RCOM_1033280 RCOM_1033280 RCOM_1691140 RCOM_1691140 RCOM_0775730 RCOM_0775730 RCOM_1609680 RCOM_1609680 RCOM_1438740 RCOM_1438740
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0512220Zinc finger protein, putative. (456 aa)    
Predicted Functional Partners:
RCOM_0374000
Exosome complex exonuclease rrp43, putative.
    
  0.571
RCOM_1619480
Ethanol tolerance protein GEKO1, putative.
    
 0.560
RCOM_0026480
Nudix hydrolase domain-containing protein.
   
 0.512
RCOM_0233610
Uncharacterized protein.
  
     0.477
RCOM_0232890
Nucleic acid binding protein, putative.
  
     0.459
RCOM_1033280
DNA binding protein, putative.
  
     0.433
RCOM_1691140
Zinc_ribbon_12 domain-containing protein.
  
     0.422
RCOM_0775730
Zinc finger protein, putative.
  
   0.420
RCOM_1609680
Ccr4-not transcription complex, putative.
    
 
 0.419
RCOM_1438740
C2 domain-containing protein.
  
     0.419
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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